Re: [NTG-context] Bib support broken in lmtx

30 Jan 2021


      Am I caught in a spam filter somewhere?

Am So., 3. Jan. 2021 um 13:30 Uhr schrieb Philipp A. :
...
So, where do I go with this?
Can nobody reproduce it? Should I submit it to the bug tracker? How can I
help to get this resolved?
Am Sa., 26. Dez. 2020 um 11:29 Uhr schrieb Philipp A. 
...
:
...
Thank you, but whitespace is ignored in .bib file syntax. To prove that
whitespace handling isn’t the bug, just try accessing it:
\startluacode
local current = publications.datasets.default
tex.print('\\starttyping')
tex.print(table.serialize(current.luadata))
-- to show that the key doesn’t contain weird invisible characters, I’ll
type it here:
tex.print(table.serialize(current.luadata.angerer2016))
tex.print('\\stoptyping')
\stopluacode
will display:
t={
  ["angerer2016"]={
    ["author"]="Angerer...",
    ["category"]="article",
    ...
  },
}
t={
  ["author"]="Angerer...",
  ["category"]="article",
  ...
}
*Another thing*: Uncommenting the \placelistofpublications makes it
work, but not in my real document. I didn’t go through the trouble of
reproducing when *that* stops working, as I think the root cause can
probably be found with my minimal example.
Best, Phil
Am Fr., 25. Dez. 2020 um 19:24 Uhr schrieb :
...
Don't know if that's related, but you should probably removethe space
before the key in your bibfile.
________________________________________
Von: ntg-context  im Auftrag von Philipp A.

Gesendet: Freitag, 25. Dezember 2020 18:36:33
An: ConTeXt Mailing List
Betreff: [NTG-context] Bib support broken in lmtx
Hi! A pretty minimal document using a bibliography is broken for me:
test.lmtx:
\enableregime[utf-8]
\mainlanguage[en]
\usebtxdataset[default][test.bib]
\setupbtx[dataset=default]
\usebtxdefinitions[apa]
\starttext
\cite[authoryear][angerer2016]
%\placelistofpublications[default][method=dataset]
\stoptext
test.bib:
@Article{ angerer2016,
author = {Angerer, Philipp and Haghverdi, Laleh and B{\"{u}}ttner, Maren
and Theis, Fabian J and Marr, Carsten and Buettner, Florian},
doi = {10.1093/bioinformatics/btv715},
issn = {14602059},
journal = {Bioinformatics},
language = {en},
number = {8},
pages = {1241--1243},
title = {{Destiny: Diffusion maps for large-scale single-cell data in
R}},
url = {
http://bioinformatics.oxfordjournals.org/lookup/doi/10.1093/bioinformatics/b...
files/103/Angerer et al. - 2016 - destiny diffusion maps for large-scale
single-cel.pdf},
volume = {32},
year = {2016}
}
This log occurs:
❯ context test.lmtx
resolvers       | formats | executing runner 'run luametatex format':
~/Library/ConTeXt/tex/texmf-osx-64/bin/luametatex --jobname="test"
--fmt=~/Library/ConTeXt/tex/texmf-cache/luatex-cache/context/5fe67e0bfe781ce0dde776fb1556f32e/formats/luametatex/cont-en.fmt
--lua=~/Library/ConTeXt/tex/texmf-cache/luatex-cache/context/5fe67e0bfe781ce0dde776fb1556f32e/formats/luametatex/cont-en.lui
--c:currentrun=1 --c:fulljobname="./test.lmtx" --c:input="./test.lmtx"
--c:kindofrun=1 --c:maxnofruns=9
--c:texmfbinpath="~/Library/ConTeXt/tex/texmf-osx-64/bin"
system          >
system          > ConTeXt  ver: 2020.12.24 17:30 LMTX  fmt: 2020.12.25
int: english/english
system          >
system          > 'cont-new.mkxl' loaded
open source     > level 1, order 1, name
'~/Library/ConTeXt/tex/texmf-context/tex/context/base/mkxl/cont-new.mkxl'
system          > beware: some patches loaded from cont-new.mkiv
close source    > level 1, order 1, name
'~/Library/ConTeXt/tex/texmf-context/tex/context/base/mkxl/cont-new.mkxl'
system          > files > jobname 'test', input './test.lmtx', result
'test'
fonts           > latin modern fonts are not preloaded
languages       > language 'en' is active
open source     > level 1, order 2, name './test.lmtx'
publications    > adding bib data to set 'default' from source 'test.bib'
open source     > level 2, order 3, name
~/Library/ConTeXt/tex/texmf-context/tex/context/base/mkiv/publ-imp-apa.mkvi'
close source    > level 2, order 3, name
'~/Library/ConTeXt/tex/texmf-context/tex/context/base/mkiv/publ-imp-apa.mkvi'
fonts           > preloading latin modern fonts (second stage)
fonts           > 'fallback modern-designsize rm 12pt' is loaded
publications    > analyzing previous publication run for 'default'
publications    > no entry 'angerer2016' found in dataset 'default'
backend         > xmp > using file
'~/Library/ConTeXt/tex/texmf-context/tex/context/base/mkiv/lpdf-pdx.xml'
pages           > flushing realpage 1, userpage 1, subpage 1
close source    > level 1, order 3, name './test.lmtx'
mkiv lua stats  > used config file:
selfautoparent:/texmf/web2c/texmfcnf.lua
mkiv lua stats  > used cache path:
~/Library/ConTeXt/tex/texmf-cache/luatex-cache/context/5fe67e0bfe781ce0dde776fb1556f32e
mkiv lua stats  > resource resolver: loadtime 0.004 seconds, 0 scans
with scantime 0.000 seconds, 0 shared scans, 13 found files, scanned paths:
<none>
mkiv lua stats  > stored bytecode data: 476 modules (0.204 sec), 95
tables (0.012 sec), 571 chunks (0.216 sec)
mkiv lua stats  > traced context: maxstack: 1517, freed: 0, unreachable:
1517
mkiv lua stats  > cleaned up reserved nodes: 58 nodes, 435 lists of 434
mkiv lua stats  > node memory usage: 6 attribute, 3 attribute_list, 1
glue, 36 glue_spec, 3 kern, 2 penalty, 1 temp, 1 whatsit
mkiv lua stats  > node list callback tasks: 8 unique task lists, 7
instances (re)created, 38 calls
mkiv lua stats  > used backend: pdf (backend for directly generating pdf
output)
mkiv lua stats  > jobdata time: 0.001 seconds saving, 0.001 seconds
loading
mkiv lua stats  > callbacks: internal: 0, file: 0, direct: 0, late: 0,
function 0, total: 0 (0 per page)
mkiv lua stats  > randomizer: resumed with value 0.37495928832999
mkiv lua stats  > loaded patterns: en::1, load time: 0.000
mkiv lua stats  > loaded fonts: 2 files: latinmodern-math.otf,
lmroman12-regular.otf
mkiv lua stats  > font engine: otf 3.112, afm 1.513, tfm 1.000, 7
instances, 3 shared in backend, 3 common vectors, 0 common hashes, load
time 0.156 seconds
mkiv lua stats  > publications load time: 0.004 seconds, 1396 bytes, 1
definitions, 0 shortcuts
mkiv lua stats  > font embedding time: 0.006 seconds, 1 fonts
mkiv lua stats  > result saved in file: test.pdf, compresslevel 1,
objectcompresslevel 3
mkiv lua stats  > used platform: osx-64, type: unix, binary subtree:
texmf-osx-64
mkiv lua stats  > used engine: luametatex version: 2.0808, functionality
level: 20201222, format id: 551, compiler: clang
mkiv lua stats  > tex properties: 740027 hash slots used of 2097152,
45811 control sequences, approximate memory usage: 28 MB
mkiv lua stats  > lua properties: engine: lua 5.4, used memory: 45 MB,
ctx: 43 MB, max: 46 MB, symbol mask: utf (τεχ)
mkiv lua stats  > runtime: 0.457 seconds, 1 processed pages, 1 shipped
pages, 2.190 pages/second
system          | total runtime: 0.474 seconds of 0.529 seconds
Best, Phil
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